here is the best list i have as of the 2008 indoor season (will not include tracks that were still under construction at that time, such as a&m):
Albuquerque, NM Convention Center
Atlanta, GA Georgia Dome
Blacksburg, VA Rector Fieldhouse
Bloomington, IN Gladstein Fieldhouse
Boston, MA Boston U Track/Tennis
Boston, MA Reggie Lewis Center
Bozeman, MT Worthington Arena
Chapel Hill, NC Eddie Smith Fieldhouse
Fayetteville, AR Randal Tyson Center
Indianapolis, IN Hoosier/RCA Dome (previous comments have addressed the status of this track)
Indianapolis, IN National Institute of Fitness and Sport
Lawrenceville, NJ Lavino Field House
Lexington, VA Cormack Fieldhouse
Lincoln, NE Devaney Sports Arena
Long Beach, CA Long Beach Arena
Louisville, KY Broadbent Arena
Nampa, ID Idaho Sports Center
New Haven, CT Coxe Cage
New York, NY Armory Track & Field Center
Pocatello, ID Holt Arena
State College, PA Ashenfelter Track