According to Velonews,
> Fortunately for the Sky leader, the race jury, after extensive deliberation, decided not to take GC time off of the finish. Froome kept yellow, 47 seconds ahead of Orica – GreenEdge’s Adam Yates. Bauke Mollema of Trek – Segafredo moved up to third, 56 seconds back.
http://velonews.competitor.com/stages/2016-tour-de-france-stage-12