Oops, must have been a little too tired reading that protocol at night, you're right, it is 1-D...2-D was a suggested modification only.
I'm not arguing here that some people might have polymorphisms that could affect the banding pattern. But you still haven't answered my question...how are innocent people going to be punished when a shift caused by polymorphism would cause the "normal" EPO band/s to be ABSENT? Both normal and recombinant will be visible on a cheater's blot. If the normal is not in the correct spot due to polymorphism, leaving only a band in the recombinant spot, would you not conlude that further examination would be needed before this could be considered a positive test???
As for the embryonic forms, the hematopoietic system changes significantly as an organism transitions from fetus to youth to adult. I would be very surprised if you find any amount of an embryonic form expressed in an adult. While as you noted some populations might harbor this change as an adult polymorphism, AGAIN, you fail to answer how this could lead to a positive test when any shift in proper band location would EASILY be noticed by an absence of the normal band?